I haven't done the literature research, instead, I want to propose a path that could lead to accomplishing what you're talking about.
First, I want to draw your attention to K-shell emission of X-rays. This is a process where a hole in the innermost electron shell of a heavy atom is created by some external influence. This could be photoelectric absorption or another electron, as is the case in certain x-ray machines. With present technology, a hole is created and then some ordinary outer shell electron within the material moves in to replace it, emitting an x-ray in the process.
Why would this be of use? K-shell emissions show up on nuclear spectroscopy graphs, albeit comparatively low energies. This question is about chemical processes creating a measurable mass deficit. In the sense that movement of electrons are involved and no nuclear processes are involved, this can be called a "chemical" process. Additionally, a relatively large amount of energy is involved, making it a promising candidate for detection of the mass deficit by direct mass measurement.
I will defer to Wikipedia for a specific example and numbers:
The two X-ray contrast media iodine and barium have ideal K shell binding energies for absorption of X-rays, $33.2\,\rm keV$ and $37.4\,\rm keV$, respectively, which is close to the mean energy of most diagnostic X-ray beams.
I will use iodine and write the following. Note iodine-127 has a mass of $126.904473(4)\,\rm amu$.
$$
\begin{align}
M(\mathrm{^{127}I}) &= 118\,210.766\, \frac{\mathrm{MeV}}{c^2} \\
M(e) &= 0.511\, \frac{\mathrm{MeV}}{c^2} \\
Q &= 0.033\,\rm MeV
\end{align}
$$
Do you see what I did there? I selectively picked a chemical transition that has an energy just barely within the accuracy of the best mass measurement of the atom. This is why the problem is difficult. Most chemical transition are in the $\rm eV$ range. That is, the $0.000\,001\,\rm MeV$ range. And when you measure them on any inertial or weight scale, you are weighing them against the $100\,000$s of $\mathrm{MeV}/c^2$ mass scale.
Here is my proposal.
Create two species of $+1$ ionized $\mathrm{^{127}I}$, one where it is stripped of an electron in the outermost electron shell, and one where it is stripped of an electron in the innermost electron shell.
Have both of these very quickly enter a magnetic field at a high speed. Should you measure the predicted path curvature difference between the two, you have measured a mass difference from a chemical process.
Consider the reason for a second. Ordinary $\mathrm{I^+}$, the iodine-127 that is missing an electron in the outermost shell, has a very small binding energy for accepting an electron. For all practical purposes, the mass of the ion plus the mass of a free electron is almost exactly equal to the mass of a neutral Iodine atom. That is not the case by exactly $33\, \mathrm{keV}/c^2$ in the case of an electron displaced from the K-shell. The chemical transition you will be measuring the mass difference of is the transition of an outer shell electron to the inner shell.