Assuming your are standing still with one clock in your hands while the airborne clock is in motion, time passes slower in the accelerated frame with respect to the stationary frame (often called the "laboratory frame or reference").
Thus, if you could measure the difference, the clock that did not leave your hands would lead the clock that was accelerated in the gravitational field. Note that the rate at which time passes does not change within a given frame, it changes with respect to a comparative frame.
As observed from the moving frame, during the acceleration time in the stationary frame seems to elapse faster and when observed from the stationary frame, time seems to elapse slower in the moving frame.
Imagine I am standing next to a black hole, you are on Earth and we can observe each other's movement. In my frame where the acceleration from gravity is much stronger than in your frame on Earth, I would still see time on my watch pass at a "normal" rate and I would see you moving extremely fast. On Earth, time on your own watch would also pass at a "normal" rate as you would observe it in your frame, and you would see me moving extremely slow.
If you need a helpful ressource for physics check out http://hyperphysics.phy-astr.gsu.edu/hbase/hph.html#hph
Hope this helps.