Your expression for the total ion temperature works for a mixture of ideal gases. That is, if one assumes the thermal pressure of species $s$ is given by:
$$
P_{s} = n_{s} \ k_{B} \ T_{s} \tag{1}
$$
where $n_{s}$ is the number density of species $s$, $k_{B}$ is Boltzmann constant, and $T_{s}$ is the temperature of species $s$. Then the total pressure is given by:
$$
P_{tot} = \sum_{s} \ P_{s} = n_{tot} \ k_{B} \ T_{tot} \tag{2}
$$
Thus, if the pressures follow these approximations, then yes you can define the total ion temperature as:
$$
T_{tot} = \frac{\sum_{s} \ n_{s} \ k_{B} \ T_{s}}{n_{tot} \ k_{B}} \tag{3}
$$
This all breaks down, of course, if the ions cannot be approximated as ideal gases. However, it is not necessarily the case that the partial pressure approximation is completely inappropriate.