The macroscopic kinetic energy of a system of particles is the kinetic energy due to the velocity of the center of mass of the collection of particles with respect to an external frame of reference.
For example suppose you have a container filled with an ideal gas. The temperature of the gas is a measure of the average kinetic energy of the randomly moving gas particles. That is its internal kinetic energy.
Let the container be moving at constant velocity with respect to an external frame of reference (e.g., the room where the container is located). The external (macroscopic) kinetic energy of the gas in the container is $\frac{mv^2}{2}$ where $m$ is the mass of the gas and $v$ is the velocity of the container with respect to the room. This kinetic energy is independent of the internal kinetic energy, not a part of it.
The total kinetic energy of the gas is the sum of its internal and external kinetic energies.
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