Simply put: no.
There is a sense, which I think you've found already, in which magnetic forces arise from changes to the charge density produced by Lorentz transformations between the frames of different moving charges. (If you haven't read about it, or you're not fully confident about how and why it's a thing, I recommend the relevant chapter in Purcell's EM textbook.)
And, since magnetic forces can be repulsive, it is indeed a natural question to ask whether they can become strong enough to overcome the electrostatic repulsion between two charges.
... and the answer to that is: no.
The reason is that, if you have a beam of protons moving relative to a beam of electrons, you can always place your analysis in the rest frame of the proton beam (or the electron beam; you'll reach the same conclusions). There, the protons are at rest, and the electrons are moving with some velocity. The frame transformation will induce changes to the density of charge in the electron beam, mostly due to length contraction (or the elimination of it, for co-moving beams). But if the two beams consist of charge of only one sign, then the total charge density can never change sign, no matter how creative you get with relativistic length contraction.
And, moreover, magnetic effects don't matter on this new frame. Sure, the electrons are moving, and as such they produce a magnetic field, but the protons are stationary and as such they experience no magnetic Lorentz force at all.
So the interaction will always be between protons and electrons, and it will always be attractive.
Having said this, the analysis above should raise an obvious question: how come magnetic forces between current-carrying wires can be repulsive, then? The main reason is that most current-carrying conductors consist of charges of both signs, moving at different velocities. (Normally, a stationary lattice of ions combined with a slowly moving sea of electrons, but all sorts of combinations are possible or at least conceivable.) And if you have charges of both signs in the wire, then it becomes possible to get creative with Lorentz length contraction to make the total charge on the wire positive, or negative, or zero, because the charges of different signs are moving differently, and as such you can affect them differently with the length contraction.